您好，欢迎访问中国农业科学院 机构知识库！

全部

  • 全部
  • 标题
  • 学者
  • 机构
  • 关键词

Construction of a high-density genetic map using genotyping by sequencing (GBS) for quantitative trait loci (QTL) analysis of three plant morphological traits in upland cotton (Gossypium hirsutum L.)

文献类型： 外文期刊

作者： Qi, Haikun 1 ; Wang, Ning 1 ; Qiao, Wenqing 1 ; Xu, Qinghua 1 ; Zhou, Hong 1 ; Shi, Jianbin 1 ; Yan, Gentu 2 ; Huang, Qun 2 ;

作者机构： 1.State Key Laboratory of Cotton Biology, Institute of Cotton Research of Chinese Academy of Agricultural Sciences, Anyang, Henan, China

2.Chinese Acad Agr Sci, Inst Cotton Res, State Key Lab Cotton Biol, Anyang, Henan, Peoples R China

关键词： Cotton;Genotyping by sequencing;Genetic map;Plant morphological traits;Quantitative trait loci

期刊名称：EUPHYTICA （ 影响因子：1.895； 五年影响因子：2.181 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： In recent years, the production costs of cotton (Gossypium hirsutum L.) in China have continued to rise, and this has been accompanied by relatively low productivity, diminished enthusiasm of Chinese farmers for planting cotton, and the difficulty caused by high subsidies as well as the high degree of mechanized harvesting for competing crops like grains. Therefore, it is urgent to improve the level of mechanization and the scale of cotton production in China. Morphological traits play an important role in the mechanized harvesting of cotton. Plant height (PH), height of the first fruiting branch node (HFFBN), and the number of vegetative shoot (NOVS) are key cotton morphological traits that influence mechanical harvesting. The genetic basis of PH, HFFBN, and NOVS were examined in the Z571 and CCRI 49 parents as well as 188 individuals comprising the F2 mapping population. This F2 population was examined using genotyping by sequencing (GBS) with 5571 high-density polymorphism single nucleotide polymorphism (SNP) markers to construct a genetic linkage map comprised of 3187 polymorphic markers. The genetic map spanned 3828.551 cM, with an average distance of 0.687 cM between markers. The complete interval mapping method identified 17 quantitative trait loci (QTL) for PH, HFFBN, and NOVS located on chromosomes 3, 4, 5, 7, 9, 17, 19, 23, and 25. Our study provides an efficient approach for fast detection of QTL underlying complex trait variation with high accuracy, thus providing preliminary information that can improve the efficiency of subsequent machine cotton picking through breeding and molecular marker-assisted selection methods.

  • 相关文献

[1]Construction of a high-density linkage map and mapping quantitative trait loci for somatic embryogenesis using leaf petioles as explants in upland cotton (Gossypium hirsutum L.). Zhenzhen Xu,Chaojun Zhang,Xiaoyang Ge,Ni Wang,Kehai Zhou,Xiaojie Yang,Zhixia Wu,Xueyan Zhang,Chuanliang Liu,Zuoren Yang,Changfeng Li,Kun Liu,Zhaoen Yang,Yuyuan Qian,Fuguang Li.

[2]Genetic dissection of maize plant architecture with an ultra-high density bin map based on recombinant inbred lines. Zhou, Zhiqiang,Hao, Zhuanfang,Li, Mingshun,Zhang, Degui,Yong, Hongjun,Zhang, Shihuang,Weng, Jianfeng,Li, Xinhai,Zhang, Chaoshu,Zhou, Yu,Wang, Zhenhua,Zeng, Xing,Di, Hong. 2016

[3]Mapping QTLs for drought tolerance in an F-2:3 population from an inter-specific cross between Gossypium tomentosum and Gossypium hirsutum. J.Y. Zheng,G. Oluoch,M.K. Riaz Khan,X.X. Wang,X.Y. Cai,Z.L. Zhou,C.Y. Wang,Y.H. Wang,X.Y. Li,F. Liu,K.B. Wang. 2016

[4]QTL mapping for fiber quality traits across multiple generations and environments in upland cotton. Fu-Ding Sun,Jian-Hong Zhang,Shu-Fang Wang,Wan-Kui Gong,Yu-Zhen Shi,Ai-Ying Liu,Jun-Wen Li,Ju-Wu Gong,Hai-Hong Shang,You-Lu Yuan.

[5]Genetic analysis of Verticillium wilt resistance in a backcross inbred line population and a meta-analysis of quantitative trait loci for disease resistance in cotton. Jinfa Zhang,Jiwen Yu,Wenfeng Pei,Xingli Li,Joseph Said,Mingzhou Song,Soum Sanogo. 2015

[6]Cloning and Expression of the Chloroplast Copper/Zinc-Superoxide Dismutase Gene in Upland Cotton （Gossypium hirsutum L.）. Hu Genhai,Yu Shuxun,Fan Shuli,Song Meizhen. 2007

[7]兰州百合病毒病原的DAS-ELISA检测. 王发林,古勤生,刘芬,彭斌,刘丽锋. 2003

[8]2015年中国与美国棉花种植品种比较. 冯璐,毛树春. 2016

[9]A genetic linkage map of Pleurotus tuoliensis integrated with physical mapping of the de novo sequenced genome and the mating type loci. Gao, Wei,Qu, Jibin,Zhang, Jinxia,Chen, Qiang,Zhang, Yan,Huang, Chenyang,Gao, Wei,Qu, Jibin,Zhang, Jinxia,Chen, Qiang,Zhang, Yan,Huang, Chenyang,Sonnenberg, Anton. 2018

[10]Fine mapping of the temperature-sensitive semi-dwarf (Tssd) locus regulating the internode length in peach (Prunus persica). Lu, Zhenhua,Niu, Liang,Cui, Guochao,Pan, Lei,Zhang, Ruiping,Zeng, Wenfang,Wang, Zhiqiang,Chagne, David,Foster, Toshi.

[11]A Consensus Map Constructed with SSR and EST-SSR Markers Using F1 Population from Sweet Orange Tangor. Hong Qibin,Gong Guizhi,Peng Zhuchun,Xiang Suqiong,Jiang Dong,Lei Tiangang. 2010

[12]Histological and Ultrastructural Observation Reveals Significant Cellular Differences between Agrobacterium Transformed Embryogenic and Non-embryogenic Calli of Cotton. Shang, Hai-Hong,Liu, Chuan-Liang,Zhang, Chao-Jun,Li, Feng-Lian,Hong, Wei-Dong,Li, Fu-Guang.

[13]Studies on the Cotton Production Management System Based on the CottonPlus Model for Xinjiang and Huang-Huai-Hai Cotton Regions in China. Qiu Jianjun,Xiao Yingnan,Dai Yiming. 2002

[14]Effects of an alternative water source and combined agronomic practices on soil salinity and irrigated cotton in coastal saline soils. Xiaobin Wang,Yujiao Hu,Quansheng Zhao,Yan Zheng,Xueping Wu,Huijun Wu,Dianxiong Cai. 2011

[15]Study on the Relationship between Yield Formation and Water Use Efficiency of Cotton by Mulched Drip Irrigation in Xinjiang. Deng Zhong,Bai Dan,Zhai Guoliang,Feng Junjie,Zhang Wenzheng. 2011

[16]Construction of Reference Chromosome-Scale Pseudomolecules for Potato: Integrating the Potato Genome with Genetic and Physical Maps. Sharma, Sanjeev Kumar,McLean, Karen,Waugh, Robbie,Bryan, Glenn J.,Bolser, Daniel,Martin, David Michael Alan,de Boer, Jan,Visser, Richard G. F.,Bachem, Christian W. B.,Sonderkaer, Mads,Amoros, Walter,Munive, Susan,Simon, Reinhard,Bonierbale, Merideth,Carboni, Martin Federico,Feingold, Sergio E.,D'Ambrosio, Juan Martin,de la Cruz, German,Di Genova, Alex,Maass, Alejandro,Di Genova, Alex,Maass, Alejandro,Douches, David S.,Hamilton, John P.,Eguiluz, Maria,Guzman, Frank,Lozano, Roberto,Martinez, Diana,Ponce, Olga,Ramirez, Manuel,Torres, Yerisf,Orjeda, Gisella,Guo, Xiao,Li, Guangcun,Hackett, Christine A.,Li, Ying,Thomson, Susan J.,Zhang, Zhonghua,Huang, Sanwen,Mejia, Nilo,Nagy, Istvan,Milbourne, Dan,Jacobs, Jeanne M. E.,Jacobs, Jeanne M. E.,Veilleux, Richard E.. 2013

[17]Simple Sequence Repeat (SSR) Genetic Linkage Map of D Genome Diploid Cotton Derived from an Interspecific Cross between Gossypium davidsonii and Gossypium klotzschianum. Joy Nyangasi Kirungu,Yanfeng Deng,Liu, Fang,Wang, Kunbo,Xiaoyan Cai,Richard Odongo Magwanga,Zhongli Zhou,Xingxing Wang,Yuhong Wang,Zhenmei Zhang,Kunbo Wang,Fang Liu. 2018

[18]Dynamic QTL mapping for plant height in Upland cotton (Gossypium hirsutum). Shang, Lianguang,Abduweli, Abdugheni,Cai, Shihu,Liu, Fang,Wang, Kunbo,Wang, Yumei.

[19]Construction of a high-density SNP genetic map in fluecured tobacco based on SLAF-seq. Gong, Daping,Xu, Xiuhong,Wang, Chuanyi,Ren, Min,Wang, Chunkai,Chen, Mingli,Huang, Long,Xu, Xiuhong,Wang, Chunkai,Wang, Chunkai.

[20]Construction of a High-Density Simple Sequence Repeat Consensus Genetic Map for Pear (Pyrus spp.). Chen, Hui,Song, Yue,Li, Lei-Ting,Wu, Jun,Zhang, Shao-Ling,Khan, M. Awais,Korban, Schuyler S.,Li, Xiu-Gen,Korban, Schuyler S..

作者其他论文 更多>>
置顶
购物车
反馈

© 京ICP备09089781号-29 主办单位：中国农业科学院

学术资源： 中国农业科学院 农业专业知识服务系统 农科联盟资源共建共享平台 中国农业科技文献与信息服务平台 中国农业期刊集成服务平台