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Identifications of Genes Involved in ABA and MAPK Signaling Pathways Positively Regulating Cold Tolerance in Rice

文献类型： 外文期刊

作者： Ding, Guohua 1 ; Li, Zhugang 1 ; Iqbal, Zubair 3 ; Zhao, Minghui 4 ; Cui, Zhibo 4 ; Cao, Liangzi 1 ; Zhou, Jinsong 1 ; Lei, Lei 1 ; Luo, Yu 1 ; Bai, Liangming 1 ; Yang, Guang 1 ; Wang, Rongsheng 2 ; Li, Kun 2 ; Wang, Xueyang 2 ; Liu, Kai 2 ; Qu, Mingnan 3 ; Sun, Shichen 1 ;

作者机构： 1.Heilongjiang Acad Agr Sci, Inst Crop Cultivat & Tillage, Heilongjiang Rice Qual Improvement & Genet Breedin, Harbin 150086, Peoples R China

2.Heilongjiang Acad Agr Sci, Northeast Ctr Natl Salt, Alkali Tolerant Rice Technol Innovat Ctr, Harbin 150086, Peoples R China

3.Yangzhou Univ, Coll Agr, Jiangsu Key Lab Crop Genom & Mol Breeding, Yangzhou 225009, Peoples R China

4.Shenyang Agr Univ, Design & Germplasm Innovat Collaborat Innovat Ctr, Shenyang 110161, Peoples R China

5.Chinese Acad Agr Sci, Nanfan Res Inst, Sanya 572024, Peoples R China

关键词： cold stress; ABA signaling; MAPK signaling; transcriptional regulation; integrative analysis

期刊名称：PLANTS-BASEL （ 影响因子：4.1； 五年影响因子：4.5 ）

ISSN： 2223-7747

年卷期： 2025 年 14 卷 4 期

页码：

收录情况： SCI

摘要： Cold stress (CS) significantly impacts rice (Oryza sativa L.) growth during seedling and heading stages. Based on two-year field observations, this study identified two rice lines, L9 (cold stress-sensitive) and LD18 (cold stress-tolerant), showing contrasting CS responses. L9 exhibited a 38% reduction in photosynthetic efficiency, whereas LD18 remained unchanged, correlating with seed rates. Transcriptome analysis identified differentially expressed genes (DEGs) with LD18 showing enriched pathways (carbon fixation, starch/sucrose metabolism, and glutathione metabolism). LD18 displayed dramatically enhanced expression of MAPK-related genes (LOC4342017, LOC9267741, and LOC4342267) and increased ABA signaling genes (LOC4333690, LOC4345611, and LOC4335640) compared with L9 exposed to CS. Results from qPCR confirmed the enhanced expression of the three MAPK-related genes in LD18 with a dramatic reduction in L9 under CS relative to that under CK. We also observed up to 66% reduction in expression levels of the three genes related to the ABA signaling pathway in L9 relative to LD18 under CS. Consistent with the results of photosynthetic efficiency, metabolic analysis suggests pyruvate metabolism, TCA cycle, and carbon metabolism enrichment in LD18 under CS. The study reveals reprogramming of the carbon assimilation metabolic pathways, emphasizing the critical roles of the key DEGs involved in ABA and MAPK signaling pathways in positive regulation of LD18 response to CS, offering the foundation toward cold tolerance breeding through targeted gene editing.

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