Characterization of the complete chloroplast genome ofCitrus hongheensis, a key protected wild plant in Yunnan province of China
文献类型： 外文期刊
作者： Zhang, Zi-hao 1 ; Long, Chun-rui 1 ; Jiang, Yan 3 ; Bei, Xue-jun 4 ; Wang, Shaohua 1 ;
作者机构： 1.Yunnan Acad Agr Sci, Inst Trop & Subtrop Cash Crops, Baoshan 678000, Yunnan, Peoples R China
2.Fujian Agr & Forestry Univ, Coll Hort, Fuzhou, Peoples R China
3.Inst Dehong Trop Agr Res Inst Yunnan, Ruili, Peoples R China
4.Yulin Normal Univ, Coll Biol & Pharm, Yulin, Peoples R China
关键词： Citrus hongheensis; chloroplast genome; phylogenetic analysis
期刊名称：MITOCHONDRIAL DNA PART B-RESOURCES （ 影响因子：0.658； 五年影响因子：0.674 ）
ISSN：
年卷期： 2020 年 5 卷 3 期
页码：
收录情况： SCI
摘要： Citrus hongheensisis a key protected wild plant endemic to the Honghe river region in southeastern Yunnan, China. In the present study, its chloroplast genome was successfully assembled and annotated based on the Illumina Hiseq-2500 whole genome re-sequencing data. The chloroplast genome is 160,275 bp in size. Its large single copy region, small single copy region and inverted repeat region is 87,886 bp, 18,387 bp and 27,001 bp, respectively. Totally, 114 unique genes, including 80 protein-coding genes, 30 tRNAs and 4 rRNAs, were identified from theC.hongheensischloroplast genome. According to the phylogenetic analysis result, the relationship between the chloroplast genome ofC. hongheensisandC.maximawas found to be the closest.
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