Characterization of the complete chloroplast genome of Yuanjiang wild Ichang papeda (Citrus cavaleriei) in China
文献类型： 外文期刊
作者： Zhang, Zi-hao 1 ; Long, Chun-rui 1 ; Jiang, Yan 3 ; Yang, Shi-zao 1 ; Zhao, Jun 1 ; Wang, Shao-Hua 1 ;
作者机构： 1.Yunnan Acad Agr Sci, Inst Trop & Subtrop Cash Crops, Baoshan, Yunnan, Peoples R China
2.Fujian Agr & Forestry Univ, Coll Hort, Fuzhou, Peoples R China
3.Inst Dehong Trop Agr Res Inst Yunnan, Ruili, Peoples R China
关键词： Citrus cavaleriei; wild Ichang papeda; chloroplast genome; phylogenetic analysis
期刊名称：MITOCHONDRIAL DNA PART B-RESOURCES （ 影响因子：0.658； 五年影响因子：0.674 ）
ISSN：
年卷期： 2020 年 5 卷 3 期
页码：
收录情况： SCI
摘要： Ichang papeda (Citrus cavaleriei) is an endemic perennial plant in China. In this study, we assembled and annotated the complete chloroplast genome of Yuanjiang wild Ichang papeda using Illumina Hiseq-2500 sequencing data. The chloroplast genome is constituted of 160,996 bp, containing a 87,634 bp large single-copy region, a 18,762 bp small single-copy region, and a pair of 27,300 bp inverted repeat regions. The chloroplast genome contains 114 unique genes, including 80 protein-coding genes, 30 tRNAs and 4 rRNAs. Phylogenetic analysis showed that the relationship between the chloroplast gennomes ofC. cavalerieiandC.reticulatais the closest, which consistently support their chloroplast relationships.
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