Chromosomal-level genome assembly of potato tuberworm, Phthorimaea operculella: a pest of solanaceous crops
文献类型： 外文期刊
作者： Zhang, Mengdi 1 ; Cheng, Xinyue 2 ; Lin, Runmao 3 ; Xie, Bingyan 3 ; Nauen, Ralf 5 ; Rondon, Silvia I. 6 ; Zavala, Jorge A. 7 ; Palli, Subba Reddy 8 ; Li, Suhua 9 ; Xiong, Xingyao 9 ; Zhou, Wenwu 10 ; Gao, Yulin 1 ;
作者机构： 1.Chinese Acad Agr Sci, Inst Plant Protect, State Key Lab Biol Plant Dis & Insect Pests, Beijing, Peoples R China
2.Beijing Normal Univ, Coll Life Sci, Beijing, Peoples R China
3.Chinese Acad Agr Sci, Inst Vegetables & Flowers, Beijing, Peoples R China
4.Hainan Univ, Coll Plant Protect, Key Lab Green Prevent & Control Trop Plant Dis & P, Haikou, Peoples R China
5.Bayer AG, Crop Sci Div, R&D, Monheim, Germany
6.Oregon State Univ, Hermiston Agr Res & Extens Ctr, Hermiston, OR USA
7.Univ Buenos Aires, Fac Agron, Consejo Nacl Invest Cientifcas & Tecn, Inst Invest Biociencias Agr & Ambientales, Avda San Martin,C1417DSE, RA-1417 Buenos Aires, Argentina
8.Univ Kentucky, Dept Entomol, Lexington, KY USA
9.Chinese Acad Agr Sci, Agr Genom Inst Shenzhen, Shenzhen, Guangdong, Peoples R China
10.Zhejiang Univ, Inst Insect Sci, Rural Affairs Key Lab Mol Biol Crop Pathogens & In, Hangzhou, Peoples R China
11.Zhejiang Univ, Inst Insect Sci, Minist Agr, Hangzhou, Peoples R China
期刊名称：SCIENTIFIC DATA （ 影响因子：8.501； 五年影响因子：11.211 ）
ISSN：
年卷期： 2022 年 9 卷 1 期
页码：
收录情况： SCI
摘要： The potato tuberworm, Phthorimaea operculella Zeller, is an oligophagous pest feeding on crops mainly belonging to the family Solanaceae. It is one of the most destructive pests of potato worldwide and attacks foliage and tubers in the field and in storage. However, the lack of a high-quality reference genome has hindered the association of phenotypic traits with their genetic basis. Here, we report on the genome assembly of P. operculella at the chromosomal level. Using Illumina, Nanopore and Hi-C sequencing, a 648.2 Mb genome was generated from 665 contigs, with an N50 length of 3.2 Mb, and 92.0% (596/648.2 Mb) of the assembly was anchored to 29 chromosomes. In total, 16619 genes were annotated, and 92.4% of BUSCO genes were fully represented. The chromosome-level genome of P. operculella will provide a significant resource for understanding the genetic basis for the biological study of this insect, and for promoting the integrative management of this pest in future.
- 相关文献
作者其他论文 更多>>
-
Complexities in the Implementation and Maintenance of Integrated Pest Management in Potato
作者：Gao, Yulin;Alyokhin, Andrei;Prager, Sean M.;Reitz, Stuart;Huseth, Anders
关键词：integrated pest management; potato ecosystem; arthropods; farmers; insecticides
-
Gut bacteria in potato tuberworm (Phthorimaea operculella) populations are dominated by Enterococcus spp. and these play a significant role in carbohydrate metabolism and host growth
作者：Zhang, Mengdi;Yan, Junjie;Gao, Yulin;Zavala, Jorge A.;Palli, Subba Reddy;Smagghe, Guy;Smagghe, Guy;Smagghe, Guy;Gao, Yulin
关键词：Growth and development; Antibiotics; Gut metabolism; Gut structure integrity
-
Reproductive interference between Phthorimaea absoluta and Phthorimaea operculella (Lepidoptera: Gelechiidae) on 2 host plants
作者：Zhang, Mingzhu;Chen, Lilin;Zhang, Mingzhu;Yan, Junjie;Gao, Yulin;Reitz, Stuart
关键词：interspecific competition; tobacco; potato; Tuta absoluta; Phthorimaea operculella
-
4-Ethylacetophenone from Potato Plants Repels Phthorimaea operculella and Inhibits Oviposition: A Sustainable Management Strategy
作者：Ma, Xinyu;Yan, Junjie;Su, Guangyuan;Gao, Yulin;Khamis, Fathiya M.;Khamis, Fathiya M.;Hategekiman, Athanase
关键词：potato tuber moth; repellents; plant volatile; electrophysiological behavioral responses
-
Data on insect biodiversity in a Chinese potato agroecosystem from DNA metabarcoding
作者：Lin, Changjin;Liu, Chenxi;Cheng, Hongmei;Lin, Changjin;Lin, Changjin;Chen, Lilin;Ashfaq, Muhammad;Hebert, Paul D. N.;Ashfaq, Muhammad;Hebert, Paul D. N.;Gao, Yulin
关键词：
-
A molecular switch OsWRKY10-OsVQ8 orchestrates rice diterpenoid phytoalexin biosynthesis for broad-spectrum disease resistance
作者：Lin, Xianhui;Ding, Chaohui;Xiao, Wei;Wang, Jinhao;Lin, Zhuo;Sun, Xinli;Zeng, Rensen;Song, Yuanyuan;Lin, Xianhui;Li, Suhua;Ding, Chaohui;Zeng, Rensen;Song, Yuanyuan;Pan, Zhiqiang
关键词：disease resistance; diterpenoid phytoalexins;
Oryza sativa L.; OsMKK4; OsMPK6; OsVQ8; OsWRKY10 -
RNAi revolution in agriculture: unlocking mechanisms, overcoming delivery challenges, and advancing sustainable Pest control
作者：Ahmad, Shakil;Zhang, Wenfei;Jamil, Momana;Lodhi, Adil Farooq;Barati, Zahra;Kakar, Mohib Ullah;Gao, Yulin
关键词：RNA interference (RNAi); sustainable agriculture; dsRNA delivery; pest control; transgenic plants
