您好，欢迎访问中国农业科学院 机构知识库！

全部

  • 全部
  • 标题
  • 学者
  • 机构
  • 关键词

Simple Sequence Repeat (SSR) Genetic Linkage Map of D Genome Diploid Cotton Derived from an Interspecific Cross between Gossypium davidsonii and Gossypium klotzschianum

文献类型： 外文期刊

作者： Kirungu, Joy Nyangasi 1 ; Deng, Yanfeng 1 ; Cai, Xiaoyan 1 ; Magwanga, Richard Odongo 1 ; Zhou, Zhongli 1 ; Wang, Xingxing 1 ; Wang, Yuhong 1 ; Zhang, Zhenmei 1 ; Wang, Kunbo 3 ; Liu, Fang 2 ;

作者机构： 1.State Key Laboratory of Cotton Biology/Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China

2.Chinese Acad Agr Sci, Inst Cotton Res, State Key Lab Cotton Biol, Anyang 455000, Peoples R China

3.;Chinese Acad Agr Sci, Inst Cotton Res, State Key Lab Cotton Biol, Anyang 455000, Peoples R China

4.State Key Laboratory of Cotton Biology/Institute of Cotton Research, Chinese Academy of Agricultural Sciences, Anyang 455000, China;School of Biological and Physical Sciences (SBPS), Main Campus, Jaramogi Oginga Odinga University of Science and Technology (JOOUST), Main Campus, P.O. Box 210-40601 Bondo, Kenya

关键词： wild cotton spp;genetic map;polymorphic primers;null alleles

期刊名称：INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES （ 影响因子：5.923； 五年影响因子：6.132 ）

ISSN： 1422-0067

年卷期： 2018 年 19 卷 1 期

页码：

收录情况： SCI

摘要： The challenge in tetraploid cotton cultivars is the narrow genetic base and therefore, the bottleneck is how to obtain interspecific hybrids and introduce the germplasm directly from wild cotton to elite cultivars. Construction of genetic maps has provided insight into understanding the genome structure, interrelationships between organisms in relation to evolution, and discovery of genes that carry important agronomic traits in plants. In this study, we generated an interspecific hybrid between two wild diploid cottons, Gossypium davidsonii and Gossypium klotzschianum, and genotyped 188 F-2:3 populations in order to develop a genetic map. We screened 12,560 SWU Simple Sequence Repeat (SSR) primers and obtained 1000 polymorphic markers which accounted for only 8%. A total of 928 polymorphic primers were successfully scored and only 728 were effectively linked across the 13 chromosomes, but with an asymmetrical distribution. The map length was 1480.23 cM, with an average length of 2.182 cM between adjacent markers. A high percentage of the markers on the map developed, and for the physical map of G. raimondii, exhibited highly significant collinearity, with two types of duplication. High level of segregation distortion was observed. A total of 27 key genes were identified with diverse roles in plant hormone signaling, development, and defense reactions. The achievement of developing the F-2:3 population and its genetic map constructions may be a landmark in establishing a new tool for the genetic improvement of cultivars from wild plants in cotton. Our map had an increased recombination length compared to other maps developed from other D genome cotton species.

  • 相关文献

[1]A Consensus Map Constructed with SSR and EST-SSR Markers Using F1 Population from Sweet Orange Tangor. Hong Qibin,Gong Guizhi,Peng Zhuchun,Xiang Suqiong,Jiang Dong,Lei Tiangang. 2010

[2]Construction of Reference Chromosome-Scale Pseudomolecules for Potato: Integrating the Potato Genome with Genetic and Physical Maps. Sharma, Sanjeev Kumar,McLean, Karen,Waugh, Robbie,Bryan, Glenn J.,Bolser, Daniel,Martin, David Michael Alan,de Boer, Jan,Visser, Richard G. F.,Bachem, Christian W. B.,Sonderkaer, Mads,Amoros, Walter,Munive, Susan,Simon, Reinhard,Bonierbale, Merideth,Carboni, Martin Federico,Feingold, Sergio E.,D'Ambrosio, Juan Martin,de la Cruz, German,Di Genova, Alex,Maass, Alejandro,Di Genova, Alex,Maass, Alejandro,Douches, David S.,Hamilton, John P.,Eguiluz, Maria,Guzman, Frank,Lozano, Roberto,Martinez, Diana,Ponce, Olga,Ramirez, Manuel,Torres, Yerisf,Orjeda, Gisella,Guo, Xiao,Li, Guangcun,Hackett, Christine A.,Li, Ying,Thomson, Susan J.,Zhang, Zhonghua,Huang, Sanwen,Mejia, Nilo,Nagy, Istvan,Milbourne, Dan,Jacobs, Jeanne M. E.,Jacobs, Jeanne M. E.,Veilleux, Richard E.. 2013

[3]Mapping QTLs for drought tolerance in an F-2:3 population from an inter-specific cross between Gossypium tomentosum and Gossypium hirsutum. J.Y. Zheng,G. Oluoch,M.K. Riaz Khan,X.X. Wang,X.Y. Cai,Z.L. Zhou,C.Y. Wang,Y.H. Wang,X.Y. Li,F. Liu,K.B. Wang. 2016

[4]Construction of a high-density linkage map and mapping quantitative trait loci for somatic embryogenesis using leaf petioles as explants in upland cotton (Gossypium hirsutum L.). Zhenzhen Xu,Chaojun Zhang,Xiaoyang Ge,Ni Wang,Kehai Zhou,Xiaojie Yang,Zhixia Wu,Xueyan Zhang,Chuanliang Liu,Zuoren Yang,Changfeng Li,Kun Liu,Zhaoen Yang,Yuyuan Qian,Fuguang Li.

[5]Dynamic QTL mapping for plant height in Upland cotton (Gossypium hirsutum). Shang, Lianguang,Abduweli, Abdugheni,Cai, Shihu,Liu, Fang,Wang, Kunbo,Wang, Yumei.

[6]Construction of a high-density genetic map using genotyping by sequencing (GBS) for quantitative trait loci (QTL) analysis of three plant morphological traits in upland cotton (Gossypium hirsutum L.). Haikun Qi,Huang, Qun,Yan, Gentu,Ning Wang,Wenqing Qiao,Qinghua Xu,Hong Zhou,Jianbin Shi,Gentu Yan,Qun Huang.

[7]Construction of a high-density SNP genetic map in fluecured tobacco based on SLAF-seq. Gong, Daping,Xu, Xiuhong,Wang, Chuanyi,Ren, Min,Wang, Chunkai,Chen, Mingli,Huang, Long,Xu, Xiuhong,Wang, Chunkai,Wang, Chunkai.

[8]Construction of a High-Density Simple Sequence Repeat Consensus Genetic Map for Pear (Pyrus spp.). Chen, Hui,Song, Yue,Li, Lei-Ting,Wu, Jun,Zhang, Shao-Ling,Khan, M. Awais,Korban, Schuyler S.,Li, Xiu-Gen,Korban, Schuyler S..

[9]Construction of a high-density genetic linkage map in pear (Pyrus communis x Pyrus pyrifolia nakai) using SSRs and SNPs developed by SLAF-seq. Wang, Long,Wu, Jun,Yin, Hao,Zhang, Shaoling,Wang, Long,Li, Xiugen,Wang, Lei,Xue, Huabai.

[10]Genome Wide SSR High Density Genetic Map Construction from an Interspecific Cross of Gossypium hirsutum X Gossypium tomentosum. Muhammad K.R.Khan,Haodong Chen,Zhongli Zhou,Muhammad K.Ilyas,Xingxing Wang,Xiaoyan Cai,Chunying Wang,Fang Liu,Kunbo Wang. 2016

[11]High-Density Genetic Map Construction in Sugar Beet (Beta vulgaris L.) by High-Throughput Technology. Wang, Maoqian,Zhang, Hanguo,Wang, Maoqian,Wu, Zedong,Wang, Huazhong,Wang, Maoqian,Wu, Zedong,Wang, Huazhong,Xu, Yuhui. 2018

[12]High-density genetic map construction and QTLs analysis of grain yield-related traits in Sesame (Sesamum indicum L.) based on RAD-Seq techonology. Wu, Kun,Liu, Hongyan,Yang, Minmin,Wu, Wenxiong,Zuo, Yang,Zhao, Yingzhong,Tao, Ye,Ma, Huihui. 2014

[13]A genetic linkage map of hexaploid naked oat constructed with SSR markers. Song, Gaoyuan,Huo, Pengjie,Wu, Bin,Zhang, Zongwen,Zhang, Zongwen. 2015

[14]A Genetic Linkage Map of Kenaf (Hibiscus cannabinus L.) Based on SRAP, ISSR and RAPD Markers. Zhang Guang-qing,Qi Jian-min,Zhang Xiao-chen,Fnag Ping-ping,Tao Ai-fen,Lan Tao,Wu Wei-ren,Zhang Guang-qing,Qi Jian-min,Wu Wei-ren,Su Jian-guang,Liu Ai-min,Liu Ai-min. 2011

[15]A major quantitative trait locus conferring resistance to fusarium wilt was detected in cucumber by using recombinant inbred lines. Zhang, Sheng-ping,Miao, Han,Yang, Yu-hong,Xie, Bing-yan,Wang, Ye,Gu, Xing-fang.

[16]Fine mapping of the rice bacterial blight resistance gene Xa-4 and its co-segregation marker. Wang, WM,Zhou, YL,Jiang, GH,Ma, BJ,Chen, XW,Zhang, Q,Zhu, LH,Zhai, WX.

[17]A high-density genetic map for P genome of Agropyron Gaertn. based on specific-locus amplified fragment sequencing (SLAF-seq). Zhang, Yan,Zhang, Jinpeng,Gao, Ainong,Zhang, Jing,Yang, Xinming,Liu, Weihua,Li, Xiuquan,Li, Lihui,Zhang, Yan,Huang, Long.

[18]Construction of a high-density genetic map for sesame based on large scale marker development by specific length amplified fragment (SLAF) sequencing. Zhang, Yanxin,Wang, Linhai,Li, Donghua,Ding, Xia,Zhang, Xiurong,Xin, Huaigen,Ma, Chouxian,Hong, Weiguo. 2013

[19]Latest Advances in Watermelon Genomics. Guo, Shaogui,Xu, Yong,Zhang, Haiying,Gong, Guoyi,Guo, Shaogui,Zheng, Yi,Fei, Zhangjun,Huang, Sanwen,Yi, Hongping,Wu, Mingzhu,Fei, Zhangjun,Zheng, Yi. 2010

[20]Construction of a high-density genetic map for watermelon (Citrullus lanatus L.) based on large-scale SNP discovery by specific length amplified fragment sequencing (SLAF-seq). Shang, Jianli,Li, Na,Li, Nannan,Xu, Yongyang,Ma, Shuangwu,Wang, Jiming.

作者其他论文 更多>>
置顶
购物车
反馈

© 京ICP备09089781号-29 主办单位：中国农业科学院

学术资源： 中国农业科学院 农业专业知识服务系统 农科联盟资源共建共享平台 中国农业科技文献与信息服务平台 中国农业期刊集成服务平台