DerivaPredict: A User-Friendly Tool for Predicting and Evaluating Active Derivatives of Natural Products
文献类型: 外文期刊
作者: Song, Yu 1 ; Zhang, Meng 2 ; Chang, Sihao 2 ; Chu, Ganghui 1 ; Ji, Hongchao 2 ;
作者机构: 1.Kashi Univ, Coll Chem & Environm Sci, Lab Xinjiang Native Med & Edible Plant Resource Ch, Kashi 844006, Peoples R China
2.Chinese Acad Agr Sci, Agr Genom Inst Shenzhen, Shenzhen Branch, Guangdong Lab Lingnan Modern Agr,Genome Anal Lab,M, Shenzhen 518120, Peoples R China
关键词: natural product derivatives; in silico molecular design; software engineering
期刊名称:MOLECULES ( 影响因子:4.6; 五年影响因子:5.0 )
ISSN:
年卷期: 2025 年 30 卷 8 期
页码:
收录情况: SCI
摘要: While natural products and derivatives have been crucial in drug discovery, the current databases are limited to known compounds. There is a need for tools that can automatically generate and assess novel derivatives of natural products to enhance early-stage drug discovery. We present DerivaPredict (v1.0), a user-friendly tool that generates novel natural product derivatives through chemical and metabolic transformations. It predicts binding affinities using pretrained deep learning models and assesses drug-likeness via ADMET profiling. DerivaPredict is freely accessible with a source code on GitHub.
- 相关文献
作者其他论文 更多>>
-
Regional airflow velocity control to meet the diverse requirements of unevenly distributed maize threshing mixtures
作者:Zhang, Meng;Cheng, Chao;Fu, Jun;Chen, Zhi;Ren, Luquan;Zhang, Meng;Fu, Jun;Chen, Zhi;Cheng, Chao;Ren, Luquan
关键词:Harvesting; Combined cleaning fan; Load monitoring; Speed prediction; Precision control
-
ICVAE: Interpretable Conditional Variational Autoencoder for De Novo Molecular Design
作者:Fan, Xiaqiong;Yue, Minghan;Li, Jiamin;Ren, Xiaozhen;Fang, Senlin;Li, Zhengyan;Ji, Hongchao;Li, Zhengyan
关键词:molecular generation; variational autoencoder; drug discovery
-
Preparation and evaluation of oral insulin nanocapsule delivery systems
作者:Zhang, Meng;Wang, Chunxin;Pan, Junqian;Wang, Mengjie;Cui, Haixin;Zhao, Xiang
关键词:Oral insulin; Nanocapsule delivery system; PLGA; Cationic modification; Sustained release
-
Complete biosynthetic pathway of furochromones in Saposhnikovia divaricata and its evolutionary mechanism in Apiaceae plants
作者:Zou, Jian-lin;Li, Hong-ye;Wang, Zi-long;Zhao, Chun-xue;Tian, Yun-gang;Zhang, Meng;Wang, Hao-tian;Ye, Min;Nie, Bao;Lin, Li-qun;Hou, Zhuang-wei;Sun, Wen-kai;Han, Xiao-xu;Wang, Li;Xu, Wei-zhe;Li, Qing-yan
关键词:
-
Construction of InDel marker-anchored genetic maps and identification of QTLs governing fruit quality-related traits in winter squash (Cucurbita maxima)
作者:Duan, Ying;He, Yadi;Shu, Qin;Ma, Wei;Zhang, Meng;Liao, Qinggui;Shi, Yuzi;Bo, Kailiang;Wang, Changlin;Zhong, Yujuan
关键词:Cucurbita maxima; QTL mapping; InDel markers; Fruit quality-related traits
-
Water-saving management sustains yield of both ordinary paddy rice and drought-resistance rice varieties with reduced irrigation water in ratoon rice production of Central China
作者:Yang, Chen;Wang, Huiping;Wang, Yucheng;Yang, Guodong;Zhang, Meng;Wu, Xiangning;Cui, Kehui;Huang, Jianliang;Peng, Shaobing;Yuan, Shen;Wang, Bin;Xu, Le;Tu, Junming;Chen, Jie;Qi, Zheng
关键词:Ratoon rice; Variety; Water management; Water-saving and drought-resistance rice; Yield
-
Adipocyte RNF20 Knockout Leads to Hyperinsulinemia via the H2Bub-H3K4me3-Slc2a4 Axis
作者:Zhao, Ying;Liang, Xiaojuan;Tang, Jiayu;Yang, Chunhuai;Yang, Shulin;Wang, Yanfang;Cao, Chunwei;Zhao, Jianguo;Zhao, Jianguo;Zhao, Jianguo;Wang, Yanfang;Yuan, Jinxiang;Zhang, Meng
关键词:adipose tissue; insulin resistance; RNF20; Slc2a4



