Nanopore-Based Comparative Transcriptome Analysis Reveals the Potential Mechanism of High-Temperature Tolerance in Cotton (Gossypium hirsutum L.)
文献类型： 外文期刊
作者： Liang, Yajun 1 ; Gong, Zhaolong 2 ; Wang, Junduo 2 ; Zheng, Juyun 2 ; Ma, Yizan 3 ; Min, Ling 3 ; Chen, Qin 1 ; Li, Zhiqiang 4 ; Qu, Yanying 1 ; Chen, Quanjia 1 ; Li, Xueyuan 2 ;
作者机构： 1.Xinjiang Agr Univ, Engn Res Ctr Cotton, Minist Educ, 311 Nongda East Rd, Urumqi 830001, Peoples R China
2.Xinjiang Acad Agr Sci, Urumqi 830001, Peoples R China
3.Huazhong Agr Univ, Natl Key Lab Crop Genet Improvement, Wuhan 430070, Peoples R China
4.Adsen Biotechnol Co Ltd, Urumqi 830022, Peoples R China
关键词： cotton; high-temperature; transcriptome; tolerance
期刊名称：PLANTS-BASEL （ 影响因子：4.658； 五年影响因子：4.827 ）
ISSN：
年卷期： 2021 年 10 卷 11 期
页码：
收录情况： SCI
摘要： Extreme high temperatures are threatening cotton production around the world due to the intensification of global warming. To cope with high-temperature stress, heat-tolerant cotton cultivars have been bred, but the heat-tolerant mechanism remains unclear. This study selected heat-tolerant ('Xinluzao36') and heat-sensitive ('Che61-72') cultivars of cotton treated with high-temperature stress as plant materials and performed comparative nanopore sequencing transcriptome analysis to reveal the potential heat-tolerant mechanism of cotton. Results showed that 120,605 nonredundant sequences were generated from the raw reads, and 78,601 genes were annotated. Differentially expressed gene (DEG) analysis showed that a total of 19,600 DEGs were screened; the DEGs involved in the ribosome, heat shock proteins, auxin and ethylene signaling transduction, and photosynthesis pathways may be attributed to the heat tolerance of the heat-tolerant cotton cultivar. This study also predicted a total of 5118 long non-coding RNAs (lncRNAs)and 24,462 corresponding target genes. Analysis of the target genes revealed that the expression of some ribosomal, heat shock, auxin and ethylene signaling transduction-related and photosynthetic proteins may be regulated by lncRNAs and further participate in the heat tolerance of cotton. This study deepens our understandings of the heat tolerance of cotton.
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