文献类型： 外文期刊

作者： Yang, Shixing ¹ ; Mao, Qingqing ¹ ; Wang, Yan ¹ ; He, Jingxian ³ ; Yang, Jie ¹ ; Chen, Xu ¹ ; Xiao, Yuqing ¹ ; He, Yumin ¹ ; Zhao, Min ¹ ; Lu, Juan ¹ ; Yang, Zijun ¹ ; Dai, Ziyuan ¹ ; Liu, Qi ¹ ; Yao, Yuxin ¹ ; Lu, Xiang ¹ ; Li, Hong ¹ ; Zhou, Rui ¹ ; Zeng, Jian ¹ ; Li, Wang ⁴ ; Zhou, Chenglin ⁴ ; Wang, Xiaochun ¹ ; Shen, Quan ¹ ; Xu, Hui ⁵ ; Deng, Xutao ⁶ ; Delwart, Eric ⁶ ; Shan, Tongling ⁸ ; Zhang, Wen ¹ ;

作者机构： 1.Jiangsu Univ, Sch Med, Dept Lab Med, Zhenjiang 212013, Jiangsu, Peoples R China

2.Jiangsu Univ, Int Genome Ctr, Zhenjiang 212013, Jiangsu, Peoples R China

3.Soochow Univ, Suzhou Med Coll, Suzhou 215123, Peoples R China

4.Jiangsu Taizhou Peoples Hosp, Dept Lab Med, Taizhou 225300, Jiangsu, Peoples R China

5.Jiangsu Univ, Affiliated Hosp, Zhenjiang 212001, Jiangsu, Peoples R China

6.Vitalant Res Inst, San Francisco, CA 94118 USA

7.Univ Calif San Francisco, Dept Lab Med, San Francisco, CA 94118 USA

8.Chinese Acad Agr Sci, Shanghai Vet Res Inst, Shanghai 200241, Peoples R China

关键词： Plant virome; Phytocommunity; Virus host switching; Co-infection; Phylogenetic analysis

期刊名称：ENVIRONMENTAL MICROBIOME （ 影响因子：6.36； 五年影响因子：6.36 ）

ISSN：

年卷期： 2022 年 17 卷 1 期

页码：

收录情况： SCI

摘要： Background Since viral metagenomic approach was applied to discover plant viruses for the first time in 2006, many plant viruses had been identified from cultivated and non-cultivated plants. These previous researches exposed that the viral communities (virome) of plants have still largely uncharacterized. Here, we investigated the virome in 161 species belonging to 38 plant orders found in a riverside ecosystem. Results We identified 245 distinct plant-associated virus genomes (88 DNA and 157 RNA viruses) belonging to 27 known viral families, orders, or unclassified virus groups. Some viral genomes were sufficiently divergent to comprise new species, genera, families, or even orders. Some groups of viruses were detected that currently are only known to infect organisms other than plants. It indicates a wider host range for members of these clades than previously recognized theoretically. We cannot rule out that some viruses could be from plant contaminating organisms, although some methods were taken to get rid of them as much as possible. The same viral species could be found in different plants and co-infections were common. Conclusions Our data describe a complex viral community within a single plant ecosystem and expand our understanding of plant-associated viral diversity and their possible host ranges.