Genetic signature of hybridization between Chinese spot-billed ducks and domesticated ducks
文献类型： 外文期刊
作者： Guo, X. 1 ; Wang, Z. -C. 1 ; Wang, S. 2 ; Li, H. -F. 4 ; Suwannapoom, C. 5 ; Wang, J. -X. 1 ; Zhang, C. 1 ; Shao, Y. 2 ; Wan 1 ;
作者机构： 1.Anhui Agr Univ, Coll Anim Sci & Technol, 130 Changjiang West Rd, Hefei 230036, Anhui, Peoples R China
2.Chinese Acad Sci, Kunming Inst Zool, State Key Lab Genet Resources & Evolut, 32 Jiaochang Dong Rd, Kunming 650223, Yunnan, Peoples R China
3.Chinese Acad Sci, Kunming Inst Zool, Yunnan Lab Mol Biol Domest Animals, 32 Jiaochang Dong Rd, Kunming 650223, Yunnan, Peoples R China
4.Chinese Acad Agr Sci, Jiangsu Inst Poultry Sci, 58 Cangjie Rode, Yangzhou 225125, Jiangsu, Peoples R China
5.Univ Phayao, Sch Agr & Nat Resources, 19 Moo 2 Tambon Maeka, Amphur Muang 56000, Phayao, Thailand
6.Univ Calif Santa Cruz, Howard Hughes Med Inst, 1156 High St, Santa Cruz, CA 95064 USA
7.Univ Calif Santa Cruz, Dept Ecol & Evolutionary Biol, 1156 High St, Santa Cruz, CA 95064 USA
关键词： adaptive evolution; duck; introgression
期刊名称：ANIMAL GENETICS （ 影响因子：3.169； 五年影响因子：3.058 ）
ISSN： 0268-9146
年卷期： 2020 年 51 卷 6 期
页码：
收录情况： SCI
摘要： In this study, we analyzed 93 whole genomes from Chinese spot-billed ducks (CSB), meat-type ducks (MET), and egg and dual purpose-type ducks (EDT) to characterize the genetic material flowing between the CSB and modern ducks. Using a frequency of shared identical-by-descent method, approximately 10.9 Mb introgression segments containing 140 genes were identified showing the signatures of introgression between CSB and EDT. Meanwhile, nearly 10.6 M introgression regions containing 149 genes were identified between CSB and MET. Based on the haplotypes tree of each segment, we found that the introgression between CSB and domesticated ducks was asymmetric with a high level of gene flow from domestic to CSB and a low level of migration in the opposite direction. Moreover, we identified several genes that were introgressions from CSB and showed the signature of positive selection, which may contribute to the breeding of modern ducks. Our results provide new insight into the evolution and breeding history of domestic ducks and may be useful for the future management of wild and domestic duck populations.
- 相关文献
作者其他论文 更多>>
-
Isolation and Degradation Characteristics of a Novel Halophilic Polycyclic Aromatic Hydrocarbon-Degrading Bacterium
作者：Cao, H.;Wang, S.;Guo, L.;Zhao, B.;Wang, H.;Wang, Y.;Cao, H.
关键词：bioremediation; halophilic bacterium; PAH biodegradation; degradation pathway;
Stutzerimonas frequens -
Effects of Poly-γ-Glutamic Acid (γ-PGA) on Metabolites of Flue-Cured Tobacco Leaves Based on Metabolomics Analysis
作者：Gao, L.;Gao, J. M.;Ren, X. H.;Gao, Y. B.;Guo, X.;Huang, G. H.;Wang, X.;Cheng, C. H.;Wang, W. M.
关键词：Nicotiana tabacum; flue-cured tobacco; poly-gamma-glutamic acid (gamma-PGA); metabolite; metabolomics
-
Hydrogen sulfide: an emerging component against abiotic stress in plants
作者：Raza, A.;Sharif, Y.;Zhang, C.;Chen, H.;Tabassum, J.;Mubarik, M. S.;Anwar, S.;Zahra, N.;Hafeez, M. B.;Corpas, F. J.
关键词：Abiotic stress; antioxidant defence; crosstalk; genetic engineering; gaseous molecule; gasotransmitters; nitric oxide; phytohormones
-
LIGNIN: A DEFENSIVE SHIELD HALTING THE ENVIRONMENTAL STRESSES - A REVIEW
作者：Khan, P.;Tong, L.;Khan, S. U.;Zhang, C.;Wang, W.
关键词：abiotic stress; plant hormones; drought; minerals; toxic metals
-
Functional analysis of a putative Bombyx mori cypovirus miRNA BmCPV-miR-10 and its effect on virus replication
作者：Wang, Y.;Lin, S.;Zhao, Z.;Xu, P.;Gao, K.;Qian, H.;Zhang, Z.;Guo, X.;Qian, H.;Guo, X.
关键词：Bombyx mori; cypovirus; microRNA; BmCPV-miR-10; BmCSDE1
-
Annual analysis of field-evolved insecticide resistance in Bemisia tabaci across China
作者：Zheng, H.;Xie, W.;Fu, B.;Xiao, S.;Tan, X.;Ji, Y.;Cheng, J.;Yang, X.;Guo, Z.;Wang, S.;Wu, Q.;Xu, B.;Zhang, Y.;Zheng, H.;Fu, B.;Wang, R.;Liu, B.;Zhou, X.
关键词：Bemisia tabaci; resistance; insecticides; spirotetramat; cyantraniliprole
-
Polymorphism and Comparative Expression Analysis of THRSP Gene in Fat-Tailed and Thin-Tailed Sheep Breeds
作者：Sun, Q.;Liu, Q.;Di, R.;Wang, Y.;Wang, X.;Hu, W.;Cao, X.;Pan, Zh;Guo, X.;Chu, M.;Gan, S.;Liu, S.;Yang, Y.;Rushdi, H. E.
关键词：Altay sheep; Fat tail; THRSP gene; SNP
