中国农业科学院机构知识库

Gene flow among different teosinte taxa and into the domesticated maize gene pool

收藏
分享
全文链接

文献类型：外文期刊

作者： Warburton, Marilyn L. ¹ ; Wilkes, Garrison ² ; Taba, S. ³ ; Charcosset, Alain ⁴ ; Mir, Celine ⁴ ; Dumas, Fabrice ⁴ ; M ¹ ;

作者机构： 1.USDA ARS, Corn Host Plant Resistance Res Unit, Box 9555, Mississippi State, MS 39762 USA

2.Univ Massachusetts, Dept Biol, Boston, MA 02125 USA

3.CIMMYT, Mexico City 06600, DF, Mexico

4.INRA INA PG UPS CNRS, Stn Genet Vegetale, F-91190 Gif Sur Yvette, France

5.CAAS, Inst Crop Sci, Beijing 100081, Peoples R China

6.IITA, Ibadan, Nigeria

关键词： species evolution;gene flow;gene diversity;GenBank sequence data;biotic/abiotic stress;species in situ conservation

期刊名称：GENETIC RESOURCES AND CROP EVOLUTION （影响因子：1.524；五年影响因子：1.713 ）

ISSN：

年卷期：

页码：

收录情况： SCI

摘要： Maize (Zea mays L. ssp. mays) was domesticated from one wild species ancestor, the Balsas teosinte (Zea mays ssp. parviglumis) about 9000 years ago. Higher levels of gene diversity are found in teosinte taxa compared to maize, following domestication and selection bottlenecks. Diversity in maize can be increased via gene flow from teosinte, which has certainly occurred from various taxa, but the rate of flow from different teosinte taxa and the final impact on maize evolution has been difficult to measure. One hundred populations from six Zea taxa, both domesticated (maize) and wild (teosinte), including domesticated landraces from Asia, Africa, and the Americas, were genotyped with 17 SSR markers using 15 individuals per population. Overall levels of diversity were high, and populations could be distinguished based on markers. Relationships between populations followed most published reports, or can now help resolve previously conflicting reports. Gene flow into maize from different teosinte groups, and gene flow between different teosintes, was estimated. Evidence for contributions from the Balsas teosintes and from Chalco teosintes (Z. mays ssp. mexicana) to the maize gene pool was found, as well as from Chalco into ssp. mexicana race "Durango" and Z. mays ssp. huehuetenengensis. These contributions are almost certainly the result of post-domestication (and ongoing) exchanges. This information must give more impetus to in situ conservation of teosinte species, and use of these teosintes to continue to direct the evolution of maize, especially in response to new diseases, insect pests, and other biotic and abiotic stresses.

相关文献

[1]Molecular Characterization and Pathogenicity of Infectious Bronchitis Coronaviruses: Complicated Evolution and Epidemiology in China Caused by Cocirculation of Multiple Types of Infectious Bronchitis Coronaviruses. Liu, Shengwang,Zhang, Xiaonan,Wang, Yu,Li, Chengren,Han, Zongxi,Shao, Yuhao,Li, Huixin,Kong, Xiangang.

[2]Analysis of synonymous codon usage in porcine reproductive and respiratory syndrome virus. Liu, Yong-sheng,Zhou, Jian-hua,Chen, Hao-tai,Ma, Li-na,Ding, Yao-zhong,Wang, Meng,Zhang, Jie.

[3]Lipase Diversity in Glacier Soil Based on Analysis of Metagenomic DNA Fragments and Cell Culture. Zhang Yuhong,Shi, Pengjun,Meng, Kun,Bai, Yingguo,Wang, Guozeng,Yao, Bin,Zhang Yuhong,Liu, Wanli,Zhan, Zhichun.

[4]Molecular detection and diversity of xylanase genes in alpine tundra soil. Wang, Guozeng,Wang, Yaru,Yang, Peilong,Luo, Huiying,Huang, Huoqing,Shi, Pengjun,Meng, Kun,Yao, Bin.

[5]Identification and molecular mapping of a resistance gene to powdery mildew from the synthetic wheat line M53. Zhang, Zengyan,Xin, Zhiyong,Li, Tao,Hu, Yingkao,Duan, Xiayu.

[6]Genetic phylogeography and maternal lineages of 18 Chinese black goat breeds. Zhong, Tao,Wang, Lin Jie,Li, Li,Niu, Li Li,Wang, Jie,Jin, Peng Fei,Zhao, Wei,Zhang, Hong Ping,Zhao, Qian Jun,Ma, Yue Hui. 2013

[7]Assessment of genetic variability in population of Ditylenchus destructor (Thorne 1945) (Tylenchida: Anguinidae) from China. Huang, Wen-Kun,Peng, De-Liang,Zhang, Dong-Sheng,Jiang, Hong-Yun,Peng, Huan,Long, Hai-Bo,Ding, Zhong.

[8]Pollen-mediated gene flow in Chinese commercial fields of glufosinate-resistant canola (Brassica napus). Cai Li,Zhou Biwen,Guo XueLan,Dong CaiHua,Hu XiaoJia,Liu ShengYi,Cai Li,Hou MingSheng.

[9]Genetic diversity and differentiation of Ankole cattle populations in Uganda inferred from microsatellite data. Kugonza, D. R.,Mpairwe, D.,Kiwuwa, G. H.,Kugonza, D. R.,Jianlin, H.,Okeyo, A. M.,Hanotte, O.,Jianlin, H.,Nabasirye, M..

[10]Analysis of genetic diversity among different geographic populations of Athetis lepigone using ISSR molecular markers. Ahmed, Tofael,Liu, Yu-juan,He, Kang-lai,Wang, Zhen-ying,Wang, Zhen-ying.

[11]Natural introgression from cultivated soybean (Glycine max) into wild soybean (Glycine soja) with the implications for origin of populations of semi-wild type and for biosafety of wild species in China. Wang, Ke-Jing,Li, Xiang-Hua,Zhang, Ji-Jun,Chen, Hong,Zhang, Zhi-Liang,Yu, Guo-Dong.

[12]Evidence of genetic recombination in wheat yellow rust populations of a Chinese oversummering area. Mboup, M.,Leconte, M.,Gautier, A.,de Vallavieille-Pope, C.,Enjalbert, J.,Wan, A. M.,Chen, W.,Wan, A. M..

[13]Genetic diversity and gene flow dynamics revealed in the rare mixed populations of wild soybean (Glycine soja) and semi-wild type (Glycine gracilis) in China. Wang, Ke-Jing,Li, Xiang-Hua. 2013

[14]High gene flows promote close genetic relationship among fine wool sheep populations (Ovis aries) in China. Han Ji-long,Guo Ting-ting,Liu Jian-bin,Niu Chun-e,Yuan Chao,Yue Yao-jing,Yang Bo-hui,Yang Min. 2016

[15]Beet Webworm (Lepidoptera: Pyralidae) Migration in China: Evidence from Genetic Markers. Jiang, Xing-Fu,Cao, Wei-Ju,Zhang, Lei,Luo, Li-Zhi.

[16]The phylogeographic system survey of native sheep breeds in the eastern and southern Central Asia. Sun, W.,Ma, Y. H.,Guan, W. J.,Sun, W.,Chang, H.,Musa, H. H.,Yang, Z. P.,Tsunoda, K.,Musa, H. H..

[17]Genetic characterization and gene flow in different geographical-distance neighbouring natural populations of wild soybean (Glycine soja Sieb. & Zucc.) and implications for protection from GM soybeans. Wang, Ke-Jing,Li, Xiang-Hua.

[18]Assessment of gene flow from glyphosate-resistant transgenic soybean to conventional soybean in China. Peng, Huan,Wang, Gao-Feng,Cui, Jiang-Kuan,Zhu, Lin-Feng,Long, Hai-Bo,Peng, De-Liang,Long, Hai-Bo.

[19]The genetic structure of Asian corn borer, Ostrinia furnacalis, populations in China: Haplotype variance in northern populations and potential impact on management of resistance to transgenic maize. He, Kanglai,Wang, Zhenying,Li, Jing,Coates, Brad S.,Kim, Kyung Seok,Bourguet, Denis,Ponsard, Sergine,Ponsard, Sergine.

[20]A large-scale field study of transgene flow from cultivated rice (Oryza sativa) to common wild rice (O-rufipogon) and barnyard grass (Echinochloa crusgalli). Yuan, Qian-Hua,Shi, Lei,Qian, Qian,Liu, Wu-Ge,Kuang, Ba-Geng,Zeng, Da-Li,Liao, Yi-Long,Cao, Bin,Jia, Shi-Rong. 2006

作者其他论文更多>>

Fast-forwarding plant breeding with deep learning-based genomic prediction

作者：Gao, Shang;Yu, Tingxi;Wang, Jiankang;Li, Huihui;Gao, Shang;Yu, Tingxi;Wang, Jiankang;Li, Huihui;Rasheed, Awais;Crossa, Jose;Hearne, Sarah

关键词：artificial intelligence; deep learning; genomic prediction; plant breeding
Leveraging Automated Machine Learning for Environmental Data-Driven Genetic Analysis and Genomic Prediction in Maize Hybrids

作者：He, Kunhui;Yu, Tingxi;Gao, Shang;Chen, Shoukun;Li, Liang;Zhang, Xuecai;Huang, Changling;Xu, Yunbi;Wang, Jiankang;Li, Xinhai;Li, Huihui;He, Kunhui;Yu, Tingxi;Gao, Shang;Chen, Shoukun;Zhang, Xuecai;Huang, Changling;Wang, Jiankang;Li, Huihui;Zhang, Xuecai;Hearne, Sarah;Prasanna, Boddupalli M.

关键词：environmental data; genetic analysis; genomic selection; genotype-by-environment interactions; machine learning
EXGEP: a framework for predicting genotype-by-environment interactions using ensembles of explainable machine-learning models

作者：Yu, Tingxi;Zhang, Hao;Chen, Shoukun;Gao, Shang;Liu, Ze;Wang, Jiankang;Li, Huihui;Yu, Tingxi;Zhang, Hao;Chen, Shoukun;Gao, Shang;Liu, Ze;Wang, Jiankang;Li, Huihui;Crossa, Jose;Hearne, Sarah;Montesinos-Lopez, Osval A.

关键词：maize; machine learning; phenotypic prediction; genotype-by-environment interactions; explainable artificial intelligence
The wheat powdery mildew resistance gene Pm4 also confers resistance to wheat blast

作者：O'Hara, Tom;Steed, Andrew;Goddard, Rachel;Gaurav, Kumar;Arora, Sanu;Quiroz-Chavez, Jesus;Ramirez-Gonzalez, Ricardo;Badgami, Roshani;Gilbert, David;Wingen, Luzie;Wulff, Brande B. H.;Uauy, Cristobal;Nicholson, Paul;Sanchez-Martin, Javier;Keller, Beat;Feng, Cong;Jiang, Mei;Cheng, Shifeng;Dreisigacker, Susanne;Sanchez-Martin, Javier;Wulff, Brande B. H.;Wulff, Brande B. H.

关键词：
Wheat genetic resources have avoided disease pandemics, improved food security, and reduced environmental footprints: A review of historical impacts and future opportunities

作者：King, Julie;Grewal, Surbhi;King, Ian P.;Dreisigacker, Susanne;Reynolds, Matthew;Bandyopadhyay, Anindya;Braun, Hans-Joachim;Crespo-Herrera, Leonardo;Crossa, Jose;Govindan, Velu;Huerta, Julio;Ibba, Maria Itria;Saint Pierre, Carolina;Singh, Pawan K.;Singh, Ravi P.;Achary, V. Mohan Murali;Bhavani, Sridhar;Blasch, Gerald;Gerard, Guillermo;He, Xinyao;Hearne, Sarah;Hodson, David;Jalal Kamali, Mohammad Reza;Karwat, Hannes;Kommerell, Victor Maurice;Pixley, Kevin;Rivera-Amado, Carolina;Sansaloni, Carolina;Schulthess, Urs;Tiwari, Thakur Prasad;Crossa, Jose;Perez-Rodriguez, Paulino;Huerta, Julio;Robles-Zazueta, Carlos A.;Singh, Ravi P.;Lan, Caixia;Cheng, Shifeng;Dempewolf, Hannes;Kishii, Masahiro;Subbarao, Guntar;Flavell, Richard B.;Griffiths, Simon;Nicholson, Paul;Uauy, Cristobal;Hawkesford, Malcolm;Shewry, Peter;Howell, Phil;Kilian, Benjamin;Sharma, Shivali;Lagudah, Evans;Rebetzke, Greg;Montesinos-Lopez, Osval A.;Pinto, Francisco;Schulthess, Urs;Trethowan, Richard

关键词：climate resilience; input use efficiency; less fungicide dependence; rust epidemics; widening crop gene pools
Artificial intelligence in plant breeding

作者：Farooq, Muhammad Amjad;Gao, Shang;Huang, Zhangping;Li, Xinhai;Li, Huihui;Farooq, Muhammad Amjad;Gao, Shang;Huang, Zhangping;Li, Huihui;Hassan, Muhammad Adeel;Hassan, Muhammad Adeel;Rasheed, Awais;Hearne, Sarah;Prasanna, Boddupalli

关键词：
Development of a next generation SNP genotyping array for wheat

作者：Burridge, Amanda J.;Winfield, Mark;Przewieslik-Allen, Alexandra;Edwards, Keith J.;Barker, Gary L.;Siddique, Imteaz;Barral-Arca, Ruth;Griffiths, Simon;Cheng, Shifeng;Huang, Zejian;Feng, Cong;Dreisigacker, Susanne;Bentley, Alison R.;Brown-Guedira, Gina

关键词：genotyping; wheat; Triticum aestivum; breeding; Axiom array; single nucleotide polymorphism

Gene flow among different teosinte taxa and into the domesticated maize gene pool

作者其他论文更多>>

Fast-forwarding plant breeding with deep learning-based genomic prediction

Leveraging Automated Machine Learning for Environmental Data-Driven Genetic Analysis and Genomic Prediction in Maize Hybrids

EXGEP: a framework for predicting genotype-by-environment interactions using ensembles of explainable machine-learning models

The wheat powdery mildew resistance gene Pm4 also confers resistance to wheat blast

Wheat genetic resources have avoided disease pandemics, improved food security, and reduced environmental footprints: A review of historical impacts and future opportunities

Artificial intelligence in plant breeding

Development of a next generation SNP genotyping array for wheat

意见箱

Gene flow among different teosinte taxa and into the domesticated maize gene pool

作者其他论文 更多>>

Fast-forwarding plant breeding with deep learning-based genomic prediction

Leveraging Automated Machine Learning for Environmental Data-Driven Genetic Analysis and Genomic Prediction in Maize Hybrids

EXGEP: a framework for predicting genotype-by-environment interactions using ensembles of explainable machine-learning models

The wheat powdery mildew resistance gene Pm4 also confers resistance to wheat blast

Wheat genetic resources have avoided disease pandemics, improved food security, and reduced environmental footprints: A review of historical impacts and future opportunities

Artificial intelligence in plant breeding

Development of a next generation SNP genotyping array for wheat

意 见 箱

作者其他论文更多>>

意见箱