您好，欢迎访问天津市农业科学院 机构知识库！
天津市农业科学院机构知识库

全部

  • 全部
  • 标题
  • 学者
  • 机构
  • 关键词

Complete Genome Sequence Resource for Cercospora apii Causing Leaf Spot of Celery

文献类型： 外文期刊

作者： Yang, Lijuan 1 ; Gao, Guoxun 2 ; Gao, Wei 1 ; Zhang, Chunxiang 1 ; Wu, Feng 2 ; Huo, Jianfei 1 ; Wang, Yong 1 ;

作者机构： 1.Tianjin Acad Agr Sci, Inst Plant Protect, Tianjin 300192, Peoples R China

2.Tianjin Acad Agr Sci, Inst Vegetable Res, Tianjin 300192, Peoples R China

关键词： celery; Cercospora apii; genome; leaf spot

期刊名称：MOLECULAR PLANT-MICROBE INTERACTIONS （ 影响因子：3.5； 五年影响因子：4.1 ）

ISSN： 0894-0282

年卷期： 2023 年

页码：

收录情况： SCI

摘要： Cercospora apii is an important seedborne pathogenic fungus causing severe Cercospora leaf spot of celery worldwide. Here, we first present a complete genome assembly of C. apii QCYBC from celery, based on Illumina paired-end and PacBio long-read sequencing data. The high-quality genome assembly contains 34 scaffolds with a 34.81 Mb genome size, 330 interspersed repeat genes, 114 noncoding RNAs, and 12,631 protein-coding genes. The benchmarking universal single-copy ortholog (BUSCO) analysis indicated that 98.2% of the BUSCOs were complete, whereas 0.3, 0.7, and 1.1% were duplicated, fragmented, and missing, respectively. Based on annotation, 508 carbohydrate-active enzymes, 243 cytochromes P450 enzymes, 1,639 translocators, 1,358 transmembrane proteins, and 1,146 virulence genes were identified. This genome sequence provides a valuable reference for future studies to improve understanding of the C. apii-celery pathosystem.Copyright (c) 2023 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.

  • 相关文献
作者其他论文 更多>>
置顶
购物车
反馈

© 京ICP备09089781号-29 主办单位：天津市农业科学院

学术资源： 中国农业科学院 农业专业知识服务系统 农科联盟资源共建共享平台 中国农业科技文献与信息服务平台 中国农业期刊集成服务平台