Metagenomic reconstructions of caecal microbiome in Landes, Roman and Zhedong White geese
文献类型: 外文期刊
第一作者: Zhu, J.
作者: Zhu, J.;Song, Y.;Xiao, Y.;Ma, L.;Yang, H.;Wang, X.;Lyu, W.;Zhu, J.;Hu, C.;Zhu, J.;Hu, C.;Zhu, J.;Hu, C.
作者机构:
关键词: Geese; caecal microbiome; metagenome; MAGs; CAZymes; >
期刊名称:BRITISH POULTRY SCIENCE ( 影响因子:2.0; 五年影响因子:2.2 )
ISSN: 0007-1668
年卷期: 2023 年
页码:
收录情况: SCI
摘要: 1. The caecal microbiota in geese play a crucial role in determining the host's health, disease status and behaviour, as evidenced by extensive epidemiological data. The present investigation conducted 10x metagenomic sequencing of caecal content samples obtained from three distinct goose species, namely Landes geese, Roman geese and Zhedong White geese (n = 5), to explore the contribution of the gut microbiome to carbohydrate metabolism.2. In total, 337GB of Illumina data were generated, which identified 1,048,575 complete genes and construction of 331 metagenomic bins, encompassing 78 species from nine phyla. Firmicutes, Bacteroidetes, Actinobacteria, Proteobacteria and Bacteria were identified as the dominant phyla while Prevotella, Bacteroides, Streptococcus, and Subdoligranulum were the most abundant genera in the caecum of geese.3. The genes were allocated to 375 pathways using the Kyoto Encyclopedia of Genes and Genome (KEGG) analysis. The most abundant classes in the caecum of geese were confirmed to be glycoside hydrolases (GHs), glycosyl transferases (GTs), as identified through the carbohydrate-active enzyme (CAZyme) database mapping. Subdoligranulum variabile and Mediterraneibacter glycyrrhizinilyticus were discovered to potentially facilitate carbohydrate digestion in geese.4. Notwithstanding, further investigation and validation are required to establish a connection between these species and CAZymes. Based on binning analysis, Mediterraneibacter glycyrrhizinilyticus and Ruminococcus sp. CAG:177 are potential species in LD geese that contribute to the production of fatty liver.
分类号:
- 相关文献
作者其他论文 更多>>
-
Orychophragmus violaceus and/or chicory forage affects performance, egg quality, sensory evaluation and antioxidative properties in native laying hens
作者:Zhao, W. Y.;Zhang, Q. Q.;Zhao, Y. F.;Chang, C.;Wang, X.;Geng, A. L.;Zhao, W. Y.;Zhang, Q. Q.
关键词:Orychophragmus violaceus; chicory; laying hens; egg quality; antioxidative properties
-
Distribution and biomass estimation of Antarctic krill (Euphausia superba) off the South Orkney Islands during 2011-2020
作者:Skaret, G.;Macaulay, G. J.;Pedersen, R.;Klevjer, T. A.;Krafft, B. A.;Wang, X.;Krag, L. A.
关键词:acoustics; bathymetry; CCAMLR; industry-based survey; LSSS; acoustic-trawl survey
-
SOIL MOISTURE IMPACT ON BIOMASS PARTITIONING AND RELATIVE CHLOROPHYLL CONTENT FOR LEGUME GRASS MIXTURES IN A CONTROLLED ENVIRONMENT
作者:Bai, Y.;Xia, J.;Yang, H.;Bai, Y.;Schellenberg, M. P.;Yan, R.;Dai, J.;Wei, Z.
关键词:water stress; forage mixtures; biomass; R; S ratio; relative chlorophyll content
-
Content difference of 1-deoxynojirimycin in fifty varieties and its correlation with viability of the edible insect Bombyx mori (Lepidoptera: Bombycidae)
作者:Xiao, Y.;Shen, W. Z.;Li, Q. R.;Xing, D. X.;Yang, Q.;Xiao, Y.;Shen, W. Z.;Li, Q. R.;Xing, D. X.;Yang, Q.;Xiao, Y.;Shen, W. Z.;Li, Q. R.;Xing, D. X.;Yang, Q.
关键词:active ingredient; silkworm; quantitative determination; vitality; correlation analysis
-
Effects of Poly-γ-Glutamic Acid (γ-PGA) on Metabolites of Flue-Cured Tobacco Leaves Based on Metabolomics Analysis
作者:Gao, L.;Gao, J. M.;Ren, X. H.;Gao, Y. B.;Guo, X.;Huang, G. H.;Wang, X.;Cheng, C. H.;Wang, W. M.
关键词:Nicotiana tabacum; flue-cured tobacco; poly-gamma-glutamic acid (gamma-PGA); metabolite; metabolomics
-
ANALYSIS OF SUITABLE FERTILIZATION LEVELS AND BENEFITS OF EARLY MATURING COTTON IN REGARD TO DIFFERENT PLANT TYPES
作者:Ye, S. H.;Liu, F.;Deng, X. N.;Han, W. B.;Wang, W.;Sun, J. X.;Gao, J.;Lu, Z. W.;Zhang, E.;Yang, H.;Wang, W.;Wang, B. H.
关键词:early-maturing cotton; varieties; plant type; fertilization; benefit
-
Decorating local Li plus solvation structure and optimizing solid electrolyte interphase with potassium trifluoroacetate for dendrites-free lithium metal anodes
作者:Zeng, T.;Shu, C.;Yan, Y.;Du, D.;Xu, H.;Wen, X.;Liu, S.;Tian, G.;Wang, X.;Zeng, Y.;Wu, L.
关键词:Electrolyte additive; Potassium tri fluoroacetate; Li plus solvation environment; Electrode -electrolyte interphase; Dendrites -free Li deposition